Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-590-3p in CA Breast Richardson Cluster 13 Table contains all genes in the CA Breast Richardson cluster number 13. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-590-3p 219333 USP12 ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:20485] T 90506 LRRC46 leucine rich repeat containing 46 [Source:HGNC Symbol;Acc:25047] zzz999 6295 SAG S-antigen; retina and pineal gland (arrestin) [Source:HGNC Symbol;Acc:10521] zzz999 140870 WFDC6 WAP four-disulfide core domain 6 [Source:HGNC Symbol;Acc:16164] zzz999 257169 C9orf43 chromosome 9 open reading frame 43 [Source:HGNC Symbol;Acc:23570] zzz999 166979 CDC20B cell division cycle 20 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:24222] zzz999 317649 EIF4E3 eukaryotic translation initiation factor 4E family member 3 [Source:HGNC Symbol;Acc:31837] P T 4256 MGP matrix Gla protein [Source:HGNC Symbol;Acc:7060] zzz999 83538 TTC25 tetratricopeptide repeat domain 25 [Source:HGNC Symbol;Acc:25280] zzz999 221662 RBM24 RNA binding motif protein 24 [Source:HGNC Symbol;Acc:21539] P T 26150 RIBC2 RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:13241] zzz999 60598 KCNK15 potassium channel, subfamily K, member 15 [Source:HGNC Symbol;Acc:13814] zzz999 91775 FAM55C family with sequence similarity 55, member C [Source:HGNC Symbol;Acc:28238] T 128344 C1orf88 chromosome 1 open reading frame 88 [Source:HGNC Symbol;Acc:27009] P T 133690 CAPSL calcyphosine-like [Source:HGNC Symbol;Acc:28375] zzz999 54852 PAQR5 progestin and adipoQ receptor family member V [Source:HGNC Symbol;Acc:29645] P T 146225 CMTM2 CKLF-like MARVEL transmembrane domain containing 2 [Source:HGNC Symbol;Acc:19173] zzz999 55644 OSGEP O-sialoglycoprotein endopeptidase [Source:HGNC Symbol;Acc:18028] zzz999 283726 FAM154B family with sequence similarity 154, member B [Source:HGNC Symbol;Acc:33727] T 254956 MORN5 MORN repeat containing 5 [Source:HGNC Symbol;Acc:17841] zzz999 128153 SPATA17 spermatogenesis associated 17 [Source:HGNC Symbol;Acc:25184] T 11069 RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4 [Source:HGNC Symbol;Acc:16626] T 9027 NAT8 N-acetyltransferase 8 (GCN5-related, putative) [Source:HGNC Symbol;Acc:18069] zzz999 1525 CXADR coxsackie virus and adenovirus receptor [Source:HGNC Symbol;Acc:2559] T 2867 FFAR2 free fatty acid receptor 2 [Source:HGNC Symbol;Acc:4501] zzz999 10229 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) [Source:HGNC Symbol;Acc:2244] T 79669 C3orf52 chromosome 3 open reading frame 52 [Source:HGNC Symbol;Acc:26255] zzz999 648 BMI1 BMI1 polycomb ring finger oncogene [Source:HGNC Symbol;Acc:1066] P T 6532 SLC6A4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 [Source:HGNC Symbol;Acc:11050] zzz999 10876 EDDM3A epididymal protein 3A [Source:HGNC Symbol;Acc:16978] zzz999 171019 ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 [Source:HGNC Symbol;Acc:17111] P T 9738 zzz999 Centrosomal protein CP110 [Source:UniProtKB/Swiss-Prot;Acc:O43303] T 139212 CXorf41 chromosome X open reading frame 41 [Source:HGNC Symbol;Acc:28570] T 345895 RSPH4A radial spoke head 4 homolog A (Chlamydomonas) [Source:HGNC Symbol;Acc:21558] T 4690 NCK1 NCK adaptor protein 1 [Source:HGNC Symbol;Acc:7664] P T 150082 LCA5L Leber congenital amaurosis 5-like [Source:HGNC Symbol;Acc:1255] zzz999 200162 SPAG17 sperm associated antigen 17 [Source:HGNC Symbol;Acc:26620] zzz999 644 BLVRA biliverdin reductase A [Source:HGNC Symbol;Acc:1062] T 123264 zzz999 Organic solute transporter subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q86UW2] zzz999 92104 TTC30A tetratricopeptide repeat domain 30A [Source:HGNC Symbol;Acc:25853] zzz999 153643 FAM81B family with sequence similarity 81, member B [Source:HGNC Symbol;Acc:26335] zzz999 79696 FAM164C family with sequence similarity 164, member C [Source:HGNC Symbol;Acc:20354] zzz999 5276 SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2 [Source:HGNC Symbol;Acc:8945] T 403314 APOBEC4 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) [Source:HGNC Symbol;Acc:32152] T 23500 DAAM2 dishevelled associated activator of morphogenesis 2 [Source:HGNC Symbol;Acc:18143] T 161394 SAMD15 sterile alpha motif domain containing 15 [Source:HGNC Symbol;Acc:18631] zzz999 116224 FAM122A family with sequence similarity 122A [Source:HGNC Symbol;Acc:23490] P T 3087 HHEX hematopoietically expressed homeobox [Source:HGNC Symbol;Acc:4901] T 64184 EDDM3B epididymal protein 3B [Source:HGNC Symbol;Acc:19223] zzz999 7702 ZNF143 zinc finger protein 143 [Source:HGNC Symbol;Acc:12928] P T 129880 BBS5 Bardet-Biedl syndrome 5 [Source:HGNC Symbol;Acc:970] P T 283471 TMPRSS12 transmembrane (C-terminal) protease, serine 12 [Source:HGNC Symbol;Acc:28779] zzz999 9211 LGI1 leucine-rich, glioma inactivated 1 [Source:HGNC Symbol;Acc:6572] zzz999 56052 ALG1 asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18294] zzz999 79841 AGBL2 ATP/GTP binding protein-like 2 [Source:HGNC Symbol;Acc:26296] P T 55130 ARMC4 armadillo repeat containing 4 [Source:HGNC Symbol;Acc:25583] zzz999 79056 PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:HGNC Symbol;Acc:30799] T 137209 ZNF572 zinc finger protein 572 [Source:HGNC Symbol;Acc:26758] T 51684 SUFU suppressor of fused homolog (Drosophila) [Source:HGNC Symbol;Acc:16466] P T 54438 GFOD1 glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:21096] zzz999 1047 CLGN calmegin [Source:HGNC Symbol;Acc:2060] P T 112817 HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:25155] T 442213 C6orf138 chromosome 6 open reading frame 138 [Source:HGNC Symbol;Acc:21345] zzz999 50640 PNPLA8 patatin-like phospholipase domain containing 8 [Source:HGNC Symbol;Acc:28900] zzz999 10692 RRH retinal pigment epithelium-derived rhodopsin homolog [Source:HGNC Symbol;Acc:10450] zzz999 9947 MAGEC1 melanoma antigen family C, 1 [Source:HGNC Symbol;Acc:6812] zzz999 282890 ZNF311 zinc finger protein 311 [Source:HGNC Symbol;Acc:13847] zzz999 83899 KRTAP9-2 keratin associated protein 9-2 [Source:HGNC Symbol;Acc:16926] zzz999 55770 EXOC2 exocyst complex component 2 [Source:HGNC Symbol;Acc:24968] T 23412 COMMD3 COMM domain containing 3 [Source:HGNC Symbol;Acc:23332] zzz999 145483 FAM161B family with sequence similarity 161, member B [Source:HGNC Symbol;Acc:19854] T 51364 ZMYND10 zinc finger, MYND-type containing 10 [Source:HGNC Symbol;Acc:19412] zzz999 219681 ARMC3 armadillo repeat containing 3 [Source:HGNC Symbol;Acc:30964] zzz999 317754 POTED POTE ankyrin domain family, member D [Source:HGNC Symbol;Acc:23822] zzz999 10143 CLEC3A C-type lectin domain family 3, member A [Source:HGNC Symbol;Acc:2052] zzz999 219736 STOX1 storkhead box 1 [Source:HGNC Symbol;Acc:23508] zzz999 56413 LTB4R2 leukotriene B4 receptor 2 [Source:HGNC Symbol;Acc:19260] zzz999 84432 PROK1 prokineticin 1 [Source:HGNC Symbol;Acc:18454] zzz999 144193 AMDHD1 amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:28577] T 158293 FAM120AOS family with sequence similarity 120A opposite strand [Source:HGNC Symbol;Acc:23389] zzz999 9429 ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 [Source:HGNC Symbol;Acc:74] T 220136 CCDC11 coiled-coil domain containing 11 [Source:HGNC Symbol;Acc:26530] zzz999 26000 TBC1D10B TBC1 domain family, member 10B [Source:HGNC Symbol;Acc:24510] zzz999 2302 FOXJ1 forkhead box J1 [Source:HGNC Symbol;Acc:3816] P T 90288 C3orf25 chromosome 3 open reading frame 25 [Source:HGNC Symbol;Acc:28061] zzz999 255743 NPNT nephronectin [Source:HGNC Symbol;Acc:27405] T 5207 PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:HGNC Symbol;Acc:8872] zzz999 151790 WDR49 WD repeat domain 49 [Source:HGNC Symbol;Acc:26587] zzz999 54956 PARP16 poly (ADP-ribose) polymerase family, member 16 [Source:HGNC Symbol;Acc:26040] T 64398 MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) [Source:HGNC Symbol;Acc:18669] P T 85477 SCIN scinderin [Source:HGNC Symbol;Acc:21695] T 64078 SLC28A3 solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Source:HGNC Symbol;Acc:16484] zzz999 6927 HNF1A HNF1 homeobox A [Source:HGNC Symbol;Acc:11621] zzz999 5507 PPP1R3C protein phosphatase 1, regulatory (inhibitor) subunit 3C [Source:HGNC Symbol;Acc:9293] zzz999

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